STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT62272.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (86 aa)    
Predicted Functional Partners:
AIT60958.1
Phosphonate metabolism protein PhnL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
AIT60943.1
Phosphonate metabolism protein PhnI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.960
AIT60941.1
Phosphonate metabolism protein PhnG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.949
AIT60942.1
Phosphonate metabolism protein PhnH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.923
AIT60425.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
AIT61695.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
AIT60424.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
AIT61607.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
phnC
Phosphonate ABC transporter; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
  
 0.625
AIT61606.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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