Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
AIT61127.1Alpha 1,6 mannopyranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)    
Predicted Functional Partners:
AIT61129.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.907
AIT60056.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.855
AIT61128.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.834
AIT61130.1
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.814
AIT60348.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
AIT60463.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
AIT60401.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.751
AIT61720.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
AIT60467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
AIT61913.1
Glycoside hydrolase family 76; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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