STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT61621.1Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
AIT61623.1
Competence protein ComE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.837
AIT61620.1
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.832
AIT61622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.828
AIT60284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
AIT61501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.789
AIT61970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.788
AIT61840.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.784
arc
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.774
AIT61554.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.765
gmk
Hypothetical protein; Essential for recycling GMP and indirectly, cGMP.
    
 0.761
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.