Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AIT61673.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (736 aa)    
Predicted Functional Partners:
AIT60697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.680
AIT61600.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.680
AIT61354.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
AIT61527.1
Galactokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
AIT61672.1
Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.544
AIT61660.1
Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.
 
     0.538
AIT60336.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
AIT61215.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
AIT61421.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
AIT61190.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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