STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT61893.1NTP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
AIT60419.1
Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      0.854
AIT61892.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AIT61891.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.755
AIT61896.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.695
AIT61894.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.677
AIT61895.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.677
AIT61890.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
AIT61497.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
AIT60137.1
Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
AIT60212.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.438
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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