Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AIT61923.1Succinyl-diaminopimelate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)    
Predicted Functional Partners:
AIT61924.1
DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.
  
    0.689
AIT61925.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
AIT61922.1
Rho termination factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
AIT61921.1
Glucose-1-phosphate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.541
AIT61820.1
4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Catalyzes the formation of 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate with the subsequent phosphorylation to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate and catalyzes the hydrolysis of 4-amino-5-aminomethyl-2-methylpyrimidine to form hydroxy-pyrimidine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.538
AIT61920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
argG
Argininosuccinate synthase; Catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.449
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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