Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIT60681.1 | AIT60682.1 | CDOO_04990 | CDOO_04995 | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.953 |
AIT60681.1 | AIT61926.1 | CDOO_04990 | CDOO_12170 | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
AIT60682.1 | AIT60681.1 | CDOO_04995 | CDOO_04990 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.953 |
AIT60682.1 | AIT61926.1 | CDOO_04995 | CDOO_12170 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
AIT61926.1 | AIT60681.1 | CDOO_12170 | CDOO_04990 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
AIT61926.1 | AIT60682.1 | CDOO_12170 | CDOO_04995 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
AIT61926.1 | AIT61927.1 | CDOO_12170 | CDOO_12175 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
AIT61926.1 | AIT61928.1 | CDOO_12170 | CDOO_12180 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
AIT61926.1 | AIT62344.1 | CDOO_12170 | CDOO_12165 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.500 |
AIT61927.1 | AIT61926.1 | CDOO_12175 | CDOO_12170 | Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
AIT61927.1 | AIT61928.1 | CDOO_12175 | CDOO_12180 | Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.884 |
AIT61928.1 | AIT61926.1 | CDOO_12180 | CDOO_12170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
AIT61928.1 | AIT61927.1 | CDOO_12180 | CDOO_12175 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.884 |
AIT62344.1 | AIT61926.1 | CDOO_12165 | CDOO_12170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |