STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT62350.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (328 aa)    
Predicted Functional Partners:
AIT61982.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.861
AIT61981.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.622
AIT62005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
AIT62029.1
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
AIT62194.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.462
AIT61962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
AIT60723.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
AIT61980.1
Arabinofuranosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.438
AIT60539.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
AIT61692.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.