STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT61988.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
AIT61990.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.945
trmB
tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.875
AIT61989.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.841
AIT61254.1
Arabinofuranosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
AIT62003.1
Carbohydrate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.764
AIT60057.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.755
AIT62007.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
AIT62281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.754
AIT60794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
AIT60056.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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