STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT62023.1Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. (230 aa)    
Predicted Functional Partners:
AIT62024.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.832
AIT62026.1
CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.732
AIT62025.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
       0.685
AIT61913.1
Glycoside hydrolase family 76; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
AIT60558.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.524
AIT61313.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
AIT61305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
AIT61127.1
Alpha 1,6 mannopyranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.452
AIT60467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.445
mscL
Mechanosensitive ion channel protein MscL; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
      
 0.405
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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