STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APJ13659.130S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)    
Predicted Functional Partners:
APJ13634.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13635.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13636.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13637.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
APJ13638.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13639.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13640.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13641.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13642.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APJ13644.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
Your Current Organism:
Aeromonas aquatica
NCBI taxonomy Id: 558964
Other names: A. aquatica, Aeromonas aquatica Beaz-Hidalgo et al. 2015, Aeromonas sp. AE235, Aeromonas sp. CECT 8025, Aeromonas sp. HE157, CECT 8025, LMG 26712, LMG:26712, strain AE235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.