STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_16122Uncharacterized protein. (68 aa)    
Predicted Functional Partners:
BDCG_09395
Bystin.
   
  0.655
BDCG_02700
Pre-rRNA processing protein Tsr1.
   
  0.649
BDCG_02195
Low-temperature viability protein ltv1.
   
  0.640
BDCG_03835
Pre-rRNA-processing protein PNO1.
   
  0.640
BDCG_08198
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.635
BDCG_01113
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.633
BDCG_01898
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.633
BDCG_04304
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
  0.633
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.633
BDCG_08103
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
  0.630
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.