STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_17341Glyco_hydro_20b domain-containing protein. (230 aa)    
Predicted Functional Partners:
BDCG_17340
Uncharacterized protein.
 
     0.950
BDCG_01507
UDP-N-acetylglucosaminyltransferase, variant.
   
 
 0.610
BDCG_07500
50S ribosomal protein YmL27, variant.
    
  0.578
BDCG_00322
50S ribosomal protein L3.
    
  0.541
BDCG_08134
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
  0.537
BDCG_02557
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
  0.526
BDCG_01495
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
    
  0.510
BDCG_02744
Fungal specific transcription factor domain-containing protein.
    
  0.510
BDCG_08667
C2H2 finger domain-containing protein, variant.
   
 
 0.504
BDCG_00368
Uncharacterized protein.
    
  0.485
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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