STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_06015Vacuolar segregation protein. (663 aa)    
Predicted Functional Partners:
BDCG_05277
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.996
BDCG_03550
Rab.
    
 0.973
BDCG_01103
Rab family, other.
   
 0.935
BDCG_03159
GTP-binding protein ypt5.
   
 0.935
BDCG_09477
Ras-like GTP-binding protein RYL2.
   
 0.935
BDCG_06014
Potassium ion channel Yvc1.
 
 
    0.880
BDCG_04724
N-acetyltransferase domain-containing protein.
    
 0.850
BDCG_05836
Acetyltransferase.
    
 0.850
BDCG_04161
Phosphatidylinositol 3-kinase VPS34.
   
 0.768
BDCG_04248
Beige/BEACH domain-containing protein.
     
 0.678
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.