STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_08399Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
BDCG_02843
Pre-mRNA splicing factor prp1.
    
 
 0.856
BDCG_03996
Elongation factor 2.
    
 
 0.817
BDCG_03513
FF domain-containing protein, variant.
   
  0.811
BDCG_01717
mRNA splicing protein PRP8.
    
 
 0.801
BDCG_01205
Pinin/SDK/memA domain-containing protein.
   
  0.796
BDCG_03247
DNA binding protein SART-1.
   
   0.796
BDCG_08043
Pre-mRNA splicing helicase.
    
 
 0.788
BDCG_05499
Pre-mRNA splicing factor.
    
 
 0.782
BDCG_03743
Ubiquitin thiolesterase.
    
   0.779
BDCG_01647
U2 snRNP component HSH155, variant.
   
 
 0.764
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.