STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_00133Trafficking protein particle complex subunit 2/Sedlin, variant. (186 aa)    
Predicted Functional Partners:
BDCG_01882
Trafficking protein particle complex subunit BET3.
    
 0.998
BDCG_01230
Uncharacterized protein.
    
 0.998
BDCG_05104
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.998
BDCG_17821
Uncharacterized protein.
    
 0.996
BDCG_05247
Hypercellular protein HypA.
    
 0.996
BDCG_00264
Uncharacterized protein.
    
 0.994
BDCG_08523
TMEM1 family protein.
    
 0.993
BDCG_01983
Uncharacterized protein.
    
 0.992
BDCG_09141
BET3 family protein.
   
 0.982
BDCG_07079
GTP-binding protein ypt1.
    
 0.975
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.