STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_00472Gluconate 5-dehydrogenase. (262 aa)    
Predicted Functional Partners:
BDCG_00242
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
  0.678
BDCG_00305
[acyl-carrier-protein] S-malonyltransferase.
 
 0.670
BDCG_00099
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.669
BDCG_07326
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 
0.664
BDCG_07979
Peroxisomal targeting signal-1 receptor.
   
  0.636
BDCG_00689
Peroxisomal membrane anchor protein.
    
  0.626
BDCG_03270
Polyubiquitin.
    
  0.620
BDCG_01221
Peroxisome assembly protein 12.
    
  0.619
BDCG_06326
Peroxin-4.
   
  0.617
BDCG_09010
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
  0.603
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.