STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_01103Rab family, other. (289 aa)    
Predicted Functional Partners:
BDCG_04161
Phosphatidylinositol 3-kinase VPS34.
    
 0.974
BDCG_06015
Vacuolar segregation protein.
   
 0.935
BDCG_03159
GTP-binding protein ypt5.
  
 
 
0.927
BDCG_08802
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.923
BDCG_02529
6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase.
   
 
 0.914
BDCG_04589
E3 ubiquitin-protein ligase PEP5.
    
 
 0.911
BDCG_04905
TGF beta receptor associated protein 1.
    
 
 0.902
BDCG_01654
Lysine-specific histone demethylase 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.900
BDCG_03975
Guanine nucleotide exchange factor Vps9.
    
 0.899
BDCG_07312
VPS9 domain-containing protein.
    
 0.869
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.