STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_00170Integral membrane protein, variant. (137 aa)    
Predicted Functional Partners:
BDCG_00171
Polyadenylation factor subunit 2.
 
  
  0.746
BDCG_04938
WD domain-containing protein.
    
 0.705
BDCG_09394
Histone-lysine N-methyltransferase.
    
 0.694
BDCG_08448
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.658
BDCG_09504
Nuclear pore complex subunit Nup133.
    
 0.658
BDCG_01860
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.657
BDCG_06450
ULK/ULK protein kinase.
    
 0.657
BDCG_00334
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.656
BDCG_06435
Nuclear pore protein; Belongs to the WD repeat SEC13 family.
    
 0.653
BDCG_16764
ANK_REP_REGION domain-containing protein.
    
 0.652
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.