Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDCG_00424 | BDCG_03482 | C5G8B3 | C5GGW7 | DNA-3-methyladenine glycosylase II. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.631 |
BDCG_00424 | BDCG_04988 | C5G8B3 | C5GKV4 | DNA-3-methyladenine glycosylase II. | Ser/Thr protein phosphatase. | 0.610 |
BDCG_00424 | BDCG_05968 | C5G8B3 | C5GPS4 | DNA-3-methyladenine glycosylase II. | AP endonuclease 2. | 0.794 |
BDCG_00424 | BDCG_05973 | C5G8B3 | A0A179U386 | DNA-3-methyladenine glycosylase II. | Uncharacterized protein. | 0.794 |
BDCG_00424 | BDCG_05980 | C5G8B3 | C5GPT6 | DNA-3-methyladenine glycosylase II. | DNA polymerase. | 0.534 |
BDCG_00424 | BDCG_07000 | C5G8B3 | C5GR01 | DNA-3-methyladenine glycosylase II. | 3'-5' exonuclease/helicase. | 0.602 |
BDCG_00424 | BDCG_07698 | C5G8B3 | C5GTF5 | DNA-3-methyladenine glycosylase II. | AP endonuclease 1, variant. | 0.636 |
BDCG_00424 | BDCG_09132 | C5G8B3 | C5GXT1 | DNA-3-methyladenine glycosylase II. | Purine-nucleoside phosphorylase. | 0.631 |
BDCG_00424 | BDCG_09386 | C5G8B3 | C5GYE8 | DNA-3-methyladenine glycosylase II. | Ser/Thr protein phosphatase. | 0.610 |
BDCG_00424 | NTH1 | C5G8B3 | C5GNG8 | DNA-3-methyladenine glycosylase II. | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.576 |
BDCG_03482 | BDCG_00424 | C5GGW7 | C5G8B3 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | DNA-3-methyladenine glycosylase II. | 0.631 |
BDCG_03482 | BDCG_04988 | C5GGW7 | C5GKV4 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Ser/Thr protein phosphatase. | 0.689 |
BDCG_03482 | BDCG_09132 | C5GGW7 | C5GXT1 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Purine-nucleoside phosphorylase. | 0.530 |
BDCG_03482 | BDCG_09386 | C5GGW7 | C5GYE8 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Ser/Thr protein phosphatase. | 0.689 |
BDCG_04988 | BDCG_00424 | C5GKV4 | C5G8B3 | Ser/Thr protein phosphatase. | DNA-3-methyladenine glycosylase II. | 0.610 |
BDCG_04988 | BDCG_03482 | C5GKV4 | C5GGW7 | Ser/Thr protein phosphatase. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.689 |
BDCG_04988 | BDCG_09132 | C5GKV4 | C5GXT1 | Ser/Thr protein phosphatase. | Purine-nucleoside phosphorylase. | 0.712 |
BDCG_05968 | BDCG_00424 | C5GPS4 | C5G8B3 | AP endonuclease 2. | DNA-3-methyladenine glycosylase II. | 0.794 |
BDCG_05968 | BDCG_05980 | C5GPS4 | C5GPT6 | AP endonuclease 2. | DNA polymerase. | 0.764 |
BDCG_05968 | BDCG_07000 | C5GPS4 | C5GR01 | AP endonuclease 2. | 3'-5' exonuclease/helicase. | 0.541 |
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