STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_0020550S ribosomal protein L44e; Belongs to the eukaryotic ribosomal protein eL42 family. (159 aa)    
Predicted Functional Partners:
BDCG_01453
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
 
 
 0.992
BDCG_02505
Elongation factor 3.
   
   0.988
BDCG_06765
Elongation factor 3.
   
   0.988
BDCG_05327
50S ribosomal protein L23Ae.
   
 0.987
BDCG_02259
60S ribosomal protein L24.
   
 0.986
BDCG_04654
60S ribosomal protein.
   
 0.986
BDCG_06749
50S ribosomal protein L14e.
   
 0.986
BDCG_08309
50S ribosomal protein L31e.
   
 0.986
BDCG_09224
Uncharacterized protein.
   
 0.986
BDCG_02786
60S ribosomal protein L30.
   
 0.985
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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