Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDCG_00035 | BDCG_00215 | C5G6Q1 | C5G981 | Rad60-SLD_2 domain-containing protein. | Uncharacterized protein. | 0.835 |
BDCG_00035 | BDCG_00626 | C5G6Q1 | C5G8J4 | Rad60-SLD_2 domain-containing protein. | AP-1 complex subunit gamma. | 0.952 |
BDCG_00035 | BDCG_03858 | C5G6Q1 | C5GGE7 | Rad60-SLD_2 domain-containing protein. | AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. | 0.916 |
BDCG_00035 | BDCG_05733 | C5G6Q1 | C5GNT2 | Rad60-SLD_2 domain-containing protein. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.837 |
BDCG_00035 | BDCG_05986 | C5G6Q1 | C5GPU2 | Rad60-SLD_2 domain-containing protein. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.939 |
BDCG_00035 | BDCG_07983 | C5G6Q1 | C5GU11 | Rad60-SLD_2 domain-containing protein. | Uncharacterized protein. | 0.780 |
BDCG_00035 | BDCG_08490 | C5G6Q1 | C5GW64 | Rad60-SLD_2 domain-containing protein. | Arf/Sar family, other; Belongs to the small GTPase superfamily. Arf family. | 0.780 |
BDCG_00035 | BDCG_08491 | C5G6Q1 | C5GW65 | Rad60-SLD_2 domain-containing protein. | Uncharacterized protein. | 0.780 |
BDCG_00215 | BDCG_00035 | C5G981 | C5G6Q1 | Uncharacterized protein. | Rad60-SLD_2 domain-containing protein. | 0.835 |
BDCG_00215 | BDCG_00626 | C5G981 | C5G8J4 | Uncharacterized protein. | AP-1 complex subunit gamma. | 0.944 |
BDCG_00215 | BDCG_03566 | C5G981 | C5GH51 | Uncharacterized protein. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.835 |
BDCG_00215 | BDCG_03858 | C5G981 | C5GGE7 | Uncharacterized protein. | AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. | 0.908 |
BDCG_00215 | BDCG_05733 | C5G981 | C5GNT2 | Uncharacterized protein. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.729 |
BDCG_00215 | BDCG_05986 | C5G981 | C5GPU2 | Uncharacterized protein. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.943 |
BDCG_00215 | BDCG_07265 | C5G981 | C5GSL2 | Uncharacterized protein. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.835 |
BDCG_00215 | BDCG_07983 | C5G981 | C5GU11 | Uncharacterized protein. | Uncharacterized protein. | 0.764 |
BDCG_00215 | BDCG_08490 | C5G981 | C5GW64 | Uncharacterized protein. | Arf/Sar family, other; Belongs to the small GTPase superfamily. Arf family. | 0.764 |
BDCG_00215 | BDCG_08491 | C5G981 | C5GW65 | Uncharacterized protein. | Uncharacterized protein. | 0.764 |
BDCG_00626 | BDCG_00035 | C5G8J4 | C5G6Q1 | AP-1 complex subunit gamma. | Rad60-SLD_2 domain-containing protein. | 0.952 |
BDCG_00626 | BDCG_00215 | C5G8J4 | C5G981 | AP-1 complex subunit gamma. | Uncharacterized protein. | 0.944 |
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