STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_00319JmjC domain-containing protein. (1072 aa)    
Predicted Functional Partners:
BDCG_01714
Cytochrome c oxidase subunit 5b.
   
 0.617
BDCG_02907
Elongator complex protein 1.
   
 0.613
BDCG_05969
Cytochrome c oxidase subunit 6a; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.606
BDCG_04485
Cytochrome c oxidase polypeptide VI.
   
 0.604
BDCG_05595
Cytochrome c oxidase subunit 4.
    
 0.590
BDCG_02716
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
  0.582
BDCG_03077
Uncharacterized protein.
   
  0.582
BDCG_00380
Positive sulfur transcription regulator METR.
   
 0.571
BDCG_07196
Uncharacterized protein.
   
 0.571
BDCG_17872
Uncharacterized protein.
   
  0.499
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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