STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_00645CID domain-containing protein. (837 aa)    
Predicted Functional Partners:
BDCG_02348
G-patch DNA repair protein.
  
 0.994
BDCG_16930
CID domain-containing protein.
  
 0.985
BDCG_04023
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.
   
 0.941
BDCG_05512
Pre-mRNA-processing ATP-dependent RNA helicase PRP5.
   
 0.932
BDCG_04096
U2 small nuclear ribonucleoprotein A.
   
  0.912
BDCG_08884
Splicing factor 3a subunit 2.
    
 0.910
BDCG_03823
U2 small nuclear ribonucleoprotein B.
   
 0.905
BDCG_03461
Tudor domain-containing protein.
    
  0.905
BDCG_01647
U2 snRNP component HSH155, variant.
   
 0.899
BDCG_01204
Pre-mRNA splicing factor ini1.
   
  0.883
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.