STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_01088Clathrin-coated vesiclec protein. (692 aa)    
Predicted Functional Partners:
BDCG_00334
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
 
      0.728
BDCG_07983
Uncharacterized protein.
    
 
 0.584
BDCG_08490
Arf/Sar family, other; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.584
BDCG_08491
Uncharacterized protein.
    
 
 0.584
BDCG_02436
Inner centromere protein.
   
 
 0.573
BDCG_06726
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 
 0.573
BDCG_08671
Uncharacterized protein.
   
 
 0.573
BDCG_02319
Chitin biosynthesis protein.
    
 
 0.545
BDCG_03964
Chitin synthase.
    
 
 0.480
BDCG_08890
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
 
      0.475
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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