STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_02125Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. (405 aa)    
Predicted Functional Partners:
BDCG_04522
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.977
BDCG_02905
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.974
BDCG_06092
Isopentenyl-diphosphate delta-isomerase.
  
 
 0.963
BDCG_03260
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.958
BDCG_03704
CaaX farnesyltransferase alpha subunit Ram2, variant.
     
 0.956
BDCG_05881
26S proteasome regulatory subunit N3.
     
0.951
BDCG_07611
Tryptophan synthase.
    
 0.949
BDCG_08946
Undecaprenyl diphosphate synthase.
  
 
 0.948
BDCG_08566
Nuclear undecaprenyl pyrophosphate synthase.
  
 
 0.934
BDCG_03928
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
  0.931
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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