STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_02244DNA repair and transcription factor Ada. (514 aa)    
Predicted Functional Partners:
BDCG_05972
HMG domain-containing protein, variant 1.
    
 0.793
BDCG_08196
HMG box transcriptional regulator.
    
 0.793
BDCG_03233
Cross-pathway control protein A.
    
 0.710
BDCG_00819
Transcription initiation factor TFIIB.
    
 0.701
BDCG_00698
TATA-box-binding protein, variant.
   
 0.699
BDCG_07761
BTB domain-containing protein.
   
 0.699
BDCG_00160
Transcription initiation factor TFIIE subunit alpha.
    
  0.697
BDCG_01548
Transcription initiation factor TFIID subunit 5.
    
  0.697
BDCG_05696
mRNA cleavage factor complex component Pcf11.
     
 0.667
BDCG_01819
RNA polymerase II subunit A domain phosphatase ssu72, variant.
    
 0.657
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.