Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDCG_00406 | BDCG_01604 | C5G895 | C5GBF5 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Silencing information regulator. | 0.907 |
BDCG_00406 | BDCG_02823 | C5G895 | C5GF38 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. | 0.643 |
BDCG_00406 | BDCG_05578 | C5G895 | C5GKI9 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-dependent histone deacetylase SIR2. | 0.628 |
BDCG_00541 | BDCG_01604 | C5G8F0 | C5GBF5 | DNA glycosylase. | Silencing information regulator. | 0.923 |
BDCG_00541 | BDCG_02823 | C5G8F0 | C5GF38 | DNA glycosylase. | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. | 0.924 |
BDCG_00541 | BDCG_05578 | C5G8F0 | C5GKI9 | DNA glycosylase. | NAD-dependent histone deacetylase SIR2. | 0.931 |
BDCG_00541 | BDCG_09132 | C5G8F0 | C5GXT1 | DNA glycosylase. | Purine-nucleoside phosphorylase. | 0.953 |
BDCG_01604 | BDCG_00406 | C5GBF5 | C5G895 | Silencing information regulator. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.907 |
BDCG_01604 | BDCG_00541 | C5GBF5 | C5G8F0 | Silencing information regulator. | DNA glycosylase. | 0.923 |
BDCG_01604 | BDCG_02823 | C5GBF5 | C5GF38 | Silencing information regulator. | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. | 0.901 |
BDCG_01604 | BDCG_03506 | C5GBF5 | C5GGZ1 | Silencing information regulator. | Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family. | 0.946 |
BDCG_01604 | BDCG_04428 | C5GBF5 | C5GI42 | Silencing information regulator. | NADH pyrophosphatase. | 0.892 |
BDCG_01604 | BDCG_05103 | C5GBF5 | C5GL69 | Silencing information regulator. | Serine/threonine protein kinase. | 0.928 |
BDCG_01604 | BDCG_05578 | C5GBF5 | C5GKI9 | Silencing information regulator. | NAD-dependent histone deacetylase SIR2. | 0.816 |
BDCG_01604 | BDCG_06288 | C5GBF5 | C5GND3 | Silencing information regulator. | NAD+ kinase. | 0.928 |
BDCG_01604 | BDCG_06852 | C5GBF5 | C5GQK3 | Silencing information regulator. | Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. | 0.938 |
BDCG_01604 | BDCG_09132 | C5GBF5 | C5GXT1 | Silencing information regulator. | Purine-nucleoside phosphorylase. | 0.926 |
BDCG_02823 | BDCG_00406 | C5GF38 | C5G895 | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.643 |
BDCG_02823 | BDCG_00541 | C5GF38 | C5G8F0 | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. | DNA glycosylase. | 0.924 |
BDCG_02823 | BDCG_01604 | C5GF38 | C5GBF5 | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. | Silencing information regulator. | 0.901 |
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