STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_01760Short chain dehydrogenase/reductase. (230 aa)    
Predicted Functional Partners:
BDCG_08330
Serine palmitoyltransferase.
     
 0.740
BDCG_05817
Serine palmitoyltransferase, variant 1.
     
 0.738
BDCG_02370
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
   
 
 0.617
BDCG_04839
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
     
 0.615
BDCG_04703
C4-hydroxylase; Belongs to the sterol desaturase family.
    
 0.602
BDCG_06112
Sphingosine-1-phosphate phosphohydrolase.
    
 0.599
BDCG_03032
Neutral ceramidase.
     
 0.587
BDCG_03217
Alkaline dihydroceramidase Ydc1.
     
 0.584
BDCG_02037
5-aminolevulinate synthase, mitochondrial.
     
 0.568
BDCG_03526
8-amino-7-oxononanoate synthase.
     
 0.568
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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