STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_02858Ornithine decarboxylase antizyme. (275 aa)    
Predicted Functional Partners:
BDCG_03169
Ornithine decarboxylase, variant; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.984
BDCG_02857
Yippee family protein.
 
      0.873
BDCG_03829
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
  0.697
BDCG_04564
Proteasome subunit alpha type.
   
 
  0.658
BDCG_07045
Proteasome subunit beta.
   
 
  0.657
BDCG_06404
Proteasome subunit alpha type.
   
 
  0.652
BDCG_07665
Proteasome subunit beta.
   
 
  0.650
BDCG_05880
26S proteasome regulatory subunit N3, variant.
     
 0.648
BDCG_02543
Proteasome subunit alpha type.
   
 
  0.647
BDCG_07886
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 
  0.646
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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