STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_02871Secreted protein. (230 aa)    
Predicted Functional Partners:
BDCG_02018
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.709
BDCG_05308
tRNA modification GTPase.
   
 
 0.679
BDCG_00453
RNA methyltransferase.
  
 
 0.674
BDCG_04725
tRNA pseudouridine38/39 synthase.
    
 
 0.660
BDCG_04654
60S ribosomal protein.
   
   0.654
BDCG_03018
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.636
BDCG_08287
GTP binding protein.
   
 
 0.633
BDCG_00322
50S ribosomal protein L3.
   
 
 0.624
BDCG_05826
50S ribosomal protein L15.
   
   0.620
BDCG_07284
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
   0.620
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.