STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_03130Tyrosine--tRNA ligase. (592 aa)    
Predicted Functional Partners:
BDCG_07641
Tyrosine--tRNA ligase.
    
 0.959
BDCG_06173
tRNA-binding protein.
  
 0.869
BDCG_07611
Tryptophan synthase.
  
  
 0.862
BDCG_01656
Ubiquitin-activating enzyme E1 C.
      0.794
BDCG_03702
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.764
BDCG_05300
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.743
BDCG_08395
Leucyl-tRNA synthetase.
  
 
 0.743
BDCG_09212
Glycyl-tRNA synthetase.
  
  
 0.741
BDCG_00553
Phenylalanyl-tRNA synthetase, beta subunit.
  
  
 0.735
BDCG_02617
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.730
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.