STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_02657Amino_oxidase domain-containing protein. (511 aa)    
Predicted Functional Partners:
BDCG_00452
Chromatin remodeling complex subunit.
    
 0.776
BDCG_07611
Tryptophan synthase.
     
 0.772
BDCG_03169
Ornithine decarboxylase, variant; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.767
BDCG_01812
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.766
BDCG_01853
Histone deacetylase 1/2.
    
 0.766
BDCG_06488
Histone H2B; Belongs to the histone H2B family.
    
  0.757
BDCG_08258
Jumonji family transcription factor.
   
 0.747
BDCG_02594
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.740
BDCG_08132
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.740
BDCG_06871
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.733
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.