STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04233Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family. (252 aa)    
Predicted Functional Partners:
BDCG_17252
Importin N-terminal domain-containing protein.
   
 0.983
BDCG_09190
RING-box protein 1.
   
 0.979
BDCG_03270
Polyubiquitin.
   
 0.974
BDCG_00342
BZIP domain-containing protein.
    
 0.953
BDCG_01171
Ubiquitin-40S ribosomal protein S27a, variant.
    
 0.953
BDCG_03507
E3 ubiquitin-protein ligase TRIP12.
    
 0.945
BDCG_02107
Cullin 1; Belongs to the cullin family.
    
 0.943
BDCG_07684
Cullin 3; Belongs to the cullin family.
    
 0.934
BDCG_06846
Zinc finger protein.
   
 0.918
BDCG_07508
Uncharacterized protein.
   
 0.918
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.