STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04371P47 protein. (392 aa)    
Predicted Functional Partners:
BDCG_05013
Cell division control protein 48; Belongs to the AAA ATPase family.
   
 0.998
BDCG_03754
UBX domain-containing protein.
    
 0.981
BDCG_09349
AAA family ATPase.
   
 0.974
BDCG_03943
Polyubiquitin binding protein.
    
 
 0.970
BDCG_05360
OTU-like cysteine protease.
   
 
 0.965
BDCG_04896
UBX domain-containing protein.
    
 0.956
BDCG_02363
UBX domain-containing protein.
   
 0.953
BDCG_06987
UBX domain-containing protein.
    
 
 0.949
BDCG_05657
Ubiquitin fusion degradation protein Ufd1.
   
 
 0.942
BDCG_02935
Ubiquitin conjugation factor E4 B.
  
 
 
 0.940
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.