STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04509RNA polymerase III transcription factor subunit. (655 aa)    
Predicted Functional Partners:
BDCG_01442
Uncharacterized protein.
   
 0.998
BDCG_01259
B-block_TFIIIC domain-containing protein.
    
 0.986
BDCG_00666
Transcription factor tfiiic complex subunit tfc6.
    
 0.977
BDCG_04826
Phosphoglycerate mutase.
    
 
 0.923
BDCG_01083
Transcription factor TFIIIB complex subunit brf1.
    
 0.907
BDCG_05270
Transcription factor TFIIIB component.
    
 0.827
BDCG_05610
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.798
BDCG_06617
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.787
BDCG_06045
Uncharacterized protein.
    
 0.783
BDCG_00698
TATA-box-binding protein, variant.
    
 0.776
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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