STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04517GARP complex component. (1106 aa)    
Predicted Functional Partners:
BDCG_07506
Vps52/Sac2 family protein.
    
 0.996
BDCG_01454
GARP complex subunit Vps53.
   
 0.995
BDCG_03587
Uncharacterized protein.
   
 0.975
BDCG_05731
Syntaxin 16; Belongs to the syntaxin family.
    
 0.887
BDCG_04477
Syntaxin-t-SNAREs.
    
 0.865
BDCG_06123
Ras-like protein Rab-6A.
    
 0.859
BDCG_02822
Cog4 domain-containing protein.
    
 0.833
BDCG_00705
Uncharacterized protein.
    
 0.829
BDCG_08347
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.829
BDCG_06156
Syntaxin 8.
    
 0.816
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.