STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04870GAT domain-containing protein. (542 aa)    
Predicted Functional Partners:
BDCG_06061
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.769
BDCG_03550
Rab.
    
  0.638
BDCG_03595
SH3 domain-containing protein.
    
 0.612
BDCG_03722
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.566
BDCG_16764
ANK_REP_REGION domain-containing protein.
    
 0.563
BDCG_01055
TBC domain-containing protein.
    
  0.523
BDCG_08218
GTPase activating protein.
    
  0.523
BDCG_00569
Vacuolar sorting receptor.
    
 
 0.513
BDCG_04149
Glycoside hydrolase family 2 multidomain protein.
     
 0.499
BDCG_01363
Uncharacterized protein.
    
   0.483
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.