STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04891D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)    
Predicted Functional Partners:
BDCG_03182
Alanine-glyoxylate transaminase/(R)-3-amino-2-methylpropionate-pyruvate transaminase.
  
 
 0.943
BDCG_06769
Malate synthase; Belongs to the malate synthase family.
  
 
 0.936
BDCG_07327
Uncharacterized protein.
    
 0.933
BDCG_06764
Isocitrate lyase.
  
 
 0.927
BDCG_06280
4-hydroxy-2-oxoglutarate aldolase, mitochondrial.
  
 
 0.925
BDCG_08249
Dihydrodipicolinate synthetase; Belongs to the DapA family.
  
 
 0.925
BDCG_08888
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.925
BDCG_03918
FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 
 0.888
BDCG_03176
Dihydrodipicolinate synthetase.
  
 
 0.880
BDCG_04892
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
 
      0.857
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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