STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_05581DNA repair protein; Belongs to the complex I LYR family. (322 aa)    
Predicted Functional Partners:
BDCG_02703
PtaB protein.
    
 0.871
BDCG_05582
Ubiquitin-conjugating enzyme variant MMS2.
 
      0.811
BDCG_00337
RSC complex subunit Sfh1.
    
 0.740
BDCG_02301
MADS-box transcription factor, other eukaryote.
    
 0.727
BDCG_05449
Homeobox transcription factor.
    
 0.726
BDCG_08427
Calcium channel subunit Cch1.
    
 0.670
BDCG_17585
GATA-binding protein, other eukaryote.
    
 0.650
BDCG_08636
Response regulatory domain-containing protein.
    
 0.650
BDCG_03287
Blue light regulator 2.
    
 0.650
BDCG_04275
Clock controled protein.
    
 0.650
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.