STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_05144Aminomethyl transferase. (437 aa)    
Predicted Functional Partners:
BDCG_00114
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.815
BDCG_05414
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
     
 0.812
BDCG_02400
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
     
 0.811
BDCG_00242
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.801
BDCG_09010
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.801
BDCG_05898
Dihydrofolate reductase.
   
 
 0.777
BDCG_07971
Methylenetetrahydrofolate dehydrogenase (NAD+).
     
 0.769
BDCG_09426
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.764
BDCG_01254
N,N-dimethylglycine oxidase.
     
 0.741
BDCG_03962
FAD dependent oxidoreductase.
     
 0.741
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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