STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_05150WD repeat protein. (363 aa)    
Predicted Functional Partners:
BDCG_00171
Polyadenylation factor subunit 2.
  
 0.994
BDCG_01819
RNA polymerase II subunit A domain phosphatase ssu72, variant.
   
 0.994
BDCG_01439
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.993
BDCG_01558
mRNA cleavage and polyadenylation specificity factor complex subunit.
    
 0.991
BDCG_04005
Protein CFT1.
    
 0.991
BDCG_04718
Endoribonuclease ysh1.
   
 0.991
BDCG_06922
Pre-mRNA polyadenylation factor fip1.
   
 0.990
BDCG_03082
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.989
BDCG_09492
Zinc knuckle domain-containing protein.
    
 0.986
BDCG_03880
Splicing factor, variant.
    
 0.982
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.