STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04684Prp18 domain-containing protein, variant. (369 aa)    
Predicted Functional Partners:
BDCG_05981
Pre-mRNA-splicing factor slu7.
   
 0.995
BDCG_00062
Pre-mRNA-splicing factor cef1.
   
 
 0.977
BDCG_08043
Pre-mRNA splicing helicase.
    
 
 0.977
BDCG_08764
mRNA splicing factor.
   
 0.977
BDCG_00047
Adenosinetriphosphatase.
    
 0.970
BDCG_01996
ATP dependent RNA helicase.
    
 0.970
BDCG_05329
Cell cycle control protein cwf14.
    
 
 0.969
BDCG_01717
mRNA splicing protein PRP8.
    
 
 0.944
BDCG_01540
Pre-mRNA-splicing factor cwc22.
   
 0.942
BDCG_05752
Pre-mRNA-splicing factor syf2.
   
 0.939
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.