STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04753tRNA processing endoribonuclease Trz1. (1275 aa)    
Predicted Functional Partners:
BDCG_00130
Endonuclease.
   
   0.931
BDCG_04754
BZIP domain-containing protein.
 
      0.899
BDCG_00046
Mitochondrial ATP-dependent RNA helicase Suv3.
   
  
 0.782
BDCG_04439
Periodic tryptophan protein 2.
   
    0.750
BDCG_06179
3' exoribonuclease.
  
 
 0.646
BDCG_01821
Exosome complex endonuclease 1/ribosomal RNA processing protein.
  
 
 0.644
BDCG_06285
Exosome complex subunit Rrp46.
  
 
 0.644
BDCG_04280
tRNA (Adenine-N(1)-)-methyltransferase catalytic subunit trm61.
  
  
 0.635
BDCG_00977
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.627
BDCG_03741
Small nucleolar ribonucleoprotein complex subunit.
   
    0.616
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.