STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_06074DNA damage-binding protein 1. (1199 aa)    
Predicted Functional Partners:
BDCG_17065
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.996
BDCG_06186
WD domain-containing protein, variant.
    
 0.993
BDCG_08851
DNA excision repair protein ERCC-8.
    
 0.993
BDCG_09190
RING-box protein 1.
    
 0.993
BDCG_09121
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.991
BDCG_05624
Uncharacterized protein.
    
 0.970
BDCG_01532
WD repeat-containing protein.
    
 0.970
BDCG_06246
WD repeat protein.
    
 0.968
BDCG_08016
COP9 signalosome subunit 1.
    
 0.962
BDCG_01320
COP9 signalosome complex subunit 5.
    
 0.953
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.