STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_06285Exosome complex subunit Rrp46. (253 aa)    
Predicted Functional Partners:
BDCG_05396
Exosome complex component RRP4.
   
 0.999
BDCG_07631
3' exoribonuclease.
  
 0.999
BDCG_00117
Exosome complex component RRP45.
   
 0.998
BDCG_02289
3' exoribonuclease.
   
 0.998
BDCG_01821
Exosome complex endonuclease 1/ribosomal RNA processing protein.
   
 0.998
BDCG_06179
3' exoribonuclease.
   
 0.997
BDCG_02908
ATP-dependent RNA helicase DOB1.
   
 0.996
BDCG_05074
Exosome complex subunit Csl4.
   
 0.996
BDCG_05947
Exosome-associated family protein.
   
 0.996
BDCG_03207
Exosome complex exonuclease exoribonuclease; Belongs to the RNR ribonuclease family.
   
 0.995
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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