BDCG_05750 protein (Blastomyces dermatitidis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BDCG_05750

Protein AF-9. (277 aa)

Predicted Functional Partners:

BDCG_02939

0.979

BDCG_05255

0.977

BDCG_00085

0.976

BDCG_03672

0.976

BDCG_08205

0.976

BDCG_08213

0.975

BDCG_04507

0.975

BDCG_03532

0.970

BDCG_05655

0.961

BDCG_02756

0.949

Your Current Organism:

Blastomyces dermatitidis

NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDCG_00085	BDCG_02756	A0A179TW51	C5GEN7	Signal transducer, variant 1.	HIT finger domain-containing protein.	0.950
BDCG_00085	BDCG_02939	A0A179TW51	C5GE74	Signal transducer, variant 1.	DNA methyltransferase 1-associated protein 1.	0.977
BDCG_00085	BDCG_03532	A0A179TW51	C5GH17	Signal transducer, variant 1.	Adenosinetriphosphatase.	0.975
BDCG_00085	BDCG_03672	A0A179TW51	C5GHF7	Signal transducer, variant 1.	Chromatin modification-like protein EAF6, variant.	0.917
BDCG_00085	BDCG_04507	A0A179TW51	C5GID1	Signal transducer, variant 1.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.921
BDCG_00085	BDCG_05255	A0A179TW51	C5GLM3	Signal transducer, variant 1.	Enhancer of polycomb-like protein.	0.755
BDCG_00085	BDCG_05655	A0A179TW51	C5GKR6	Signal transducer, variant 1.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.976
BDCG_00085	BDCG_05750	A0A179TW51	C5GNU9	Signal transducer, variant 1.	Protein AF-9.	0.976
BDCG_00085	BDCG_08205	A0A179TW51	C5GV23	Signal transducer, variant 1.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.977
BDCG_00085	BDCG_08213	A0A179TW51	A0A179U6A4	Signal transducer, variant 1.	Chromatin modification-like protein eaf3.	0.966
BDCG_02756	BDCG_00085	C5GEN7	A0A179TW51	HIT finger domain-containing protein.	Signal transducer, variant 1.	0.950
BDCG_02756	BDCG_02939	C5GEN7	C5GE74	HIT finger domain-containing protein.	DNA methyltransferase 1-associated protein 1.	0.935
BDCG_02756	BDCG_03532	C5GEN7	C5GH17	HIT finger domain-containing protein.	Adenosinetriphosphatase.	0.970
BDCG_02756	BDCG_05655	C5GEN7	C5GKR6	HIT finger domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.971
BDCG_02756	BDCG_05750	C5GEN7	C5GNU9	HIT finger domain-containing protein.	Protein AF-9.	0.949
BDCG_02756	BDCG_08205	C5GEN7	C5GV23	HIT finger domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.972
BDCG_02756	BDCG_08213	C5GEN7	A0A179U6A4	HIT finger domain-containing protein.	Chromatin modification-like protein eaf3.	0.589
BDCG_02939	BDCG_00085	C5GE74	A0A179TW51	DNA methyltransferase 1-associated protein 1.	Signal transducer, variant 1.	0.977
BDCG_02939	BDCG_02756	C5GE74	C5GEN7	DNA methyltransferase 1-associated protein 1.	HIT finger domain-containing protein.	0.935
BDCG_02939	BDCG_03532	C5GE74	C5GH17	DNA methyltransferase 1-associated protein 1.	Adenosinetriphosphatase.	0.976