Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDCG_01526 | BDCG_02039 | C5GBB9 | C5GAK0 | Phosphoribosylglycinamide formyltransferase. | Carbamoyl-phosphate synthase arginine-specific small chain. | 0.662 |
BDCG_01526 | BDCG_02675 | C5GBB9 | C5GEF6 | Phosphoribosylglycinamide formyltransferase. | Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. | 0.982 |
BDCG_01526 | BDCG_03723 | C5GBB9 | C5GFU0 | Phosphoribosylglycinamide formyltransferase. | Bifunctional purine biosynthesis protein ADE17. | 0.996 |
BDCG_01526 | BDCG_04482 | C5GBB9 | C5GIA5 | Phosphoribosylglycinamide formyltransferase. | Phosphoribosylformylglycinamidine synthase. | 0.996 |
BDCG_01526 | BDCG_04650 | C5GBB9 | C5GJ72 | Phosphoribosylglycinamide formyltransferase. | Protein pyrABCN. | 0.662 |
BDCG_01526 | BDCG_05234 | C5GBB9 | C5GLK2 | Phosphoribosylglycinamide formyltransferase. | Bifunctional purine biosynthetic protein Ade1. | 0.998 |
BDCG_01526 | BDCG_05965 | C5GBB9 | C5GPS1 | Phosphoribosylglycinamide formyltransferase. | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | 0.976 |
BDCG_01526 | BDCG_06191 | C5GBB9 | C5GN23 | Phosphoribosylglycinamide formyltransferase. | Urease accessory protein UreD, variant. | 0.970 |
BDCG_01526 | BDCG_06753 | C5GBB9 | C5GQA7 | Phosphoribosylglycinamide formyltransferase. | Amidophosphoribosyltransferase, variant. | 0.991 |
BDCG_01526 | BDCG_08107 | C5GBB9 | C5GU41 | Phosphoribosylglycinamide formyltransferase. | Carbamoyl-phosphate synthase arginine-specific large chain. | 0.662 |
BDCG_02039 | BDCG_01526 | C5GAK0 | C5GBB9 | Carbamoyl-phosphate synthase arginine-specific small chain. | Phosphoribosylglycinamide formyltransferase. | 0.662 |
BDCG_02039 | BDCG_03723 | C5GAK0 | C5GFU0 | Carbamoyl-phosphate synthase arginine-specific small chain. | Bifunctional purine biosynthesis protein ADE17. | 0.517 |
BDCG_02039 | BDCG_04482 | C5GAK0 | C5GIA5 | Carbamoyl-phosphate synthase arginine-specific small chain. | Phosphoribosylformylglycinamidine synthase. | 0.774 |
BDCG_02039 | BDCG_04650 | C5GAK0 | C5GJ72 | Carbamoyl-phosphate synthase arginine-specific small chain. | Protein pyrABCN. | 0.969 |
BDCG_02039 | BDCG_05234 | C5GAK0 | C5GLK2 | Carbamoyl-phosphate synthase arginine-specific small chain. | Bifunctional purine biosynthetic protein Ade1. | 0.787 |
BDCG_02039 | BDCG_06191 | C5GAK0 | C5GN23 | Carbamoyl-phosphate synthase arginine-specific small chain. | Urease accessory protein UreD, variant. | 0.517 |
BDCG_02039 | BDCG_06753 | C5GAK0 | C5GQA7 | Carbamoyl-phosphate synthase arginine-specific small chain. | Amidophosphoribosyltransferase, variant. | 0.981 |
BDCG_02039 | BDCG_08107 | C5GAK0 | C5GU41 | Carbamoyl-phosphate synthase arginine-specific small chain. | Carbamoyl-phosphate synthase arginine-specific large chain. | 0.999 |
BDCG_02675 | BDCG_01526 | C5GEF6 | C5GBB9 | Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. | Phosphoribosylglycinamide formyltransferase. | 0.982 |
BDCG_02675 | BDCG_03723 | C5GEF6 | C5GFU0 | Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. | Bifunctional purine biosynthesis protein ADE17. | 0.932 |
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