STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_07377F-box domain-containing protein. (722 aa)    
Predicted Functional Partners:
BDCG_07376
Small nucleolar ribonucleoprotein complex subunit.
 
 
    0.751
BDCG_03916
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.737
BDCG_06319
Nitrate reductase (NADH).
    
 0.737
BDCG_01207
Epoxide hydrolase.
   
 0.676
BDCG_07611
Tryptophan synthase.
    
 0.673
BDCG_07307
Sterigmatocystin 8-O-methyltransferase.
     
 0.668
BDCG_07000
3'-5' exonuclease/helicase.
    
 0.665
BDCG_04554
Sulfite oxidase.
     
 0.655
BDCG_04640
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.652
BDCG_03288
DNA repair protein RAD50.
    
 0.643
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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