STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_07154Biotin holocarboxylase synthetase/biotin-protein ligase. (704 aa)    
Predicted Functional Partners:
BDCG_03528
Biotin synthase.
  
 
 0.964
BDCG_00139
Acetyl-CoA carboxylase.
  
 0.951
BDCG_03720
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 
 0.938
BDCG_04202
3-methylcrotonyl-CoA carboxylase beta subunit.
  
 
 0.929
BDCG_04199
3-methylcrotonyl-CoA carboxylase alpha subunit.
    
 0.928
BDCG_04099
Pantoate-beta-alanine ligase.
  
 
 0.880
BDCG_00964
Acetyl-CoA/propionyl-CoA carboxylase.
  
 
 0.852
BDCG_08832
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.852
BDCG_07575
Propionyl-CoA carboxylase beta chain.
  
 
 0.816
BDCG_03845
Uncharacterized protein.
  
 
 0.762
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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